Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 VN2R19P-201ENST00000442399 1052 ntBASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AC109635.5-201ENST00000533593 962 ntBASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
THUMPD1Q9NXG2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 AC013268.4-201ENST00000637413 2228 ntBASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 CRYGEP-201ENST00000412192 528 ntBASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 AC092910.1-201ENST00000482027 1129 ntBASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
THUMPD1Q9NXG2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 AC069224.1-201ENST00000566372 1715 ntBASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.31■□□□□ 0.04
THUMPD1Q9NXG2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms