Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC063952.2-201ENST00000498792 1227 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC093827.2-201ENST00000512654 315 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC012306.2-201ENST00000609350 630 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 REXO1L8P-201ENST00000604378 1897 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AL671710.1-201ENST00000610245 2349 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC243591.1-201ENST00000452967 1364 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 SPDYE21P-201ENST00000413323 827 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LINC00982-205ENST00000420957 435 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 MINOS1P3-201ENST00000457048 203 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 POU5F1P6-201ENST00000466990 990 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LINC01238-205ENST00000567549 1107 ntBASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SND1-IT1Q9HBX3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms