Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AC106881.1-201ENST00000605849 3329 ntBASIC14.01□□□□□ -0.17
CMTM3Q96MX0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AC233702.3-201ENST00000578656 1387 ntBASIC14.01□□□□□ -0.17
CMTM3Q96MX0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NTF6B-201ENST00000591913 560 ntBASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AL589182.2-201ENST00000619332 1049 ntBASIC14.01□□□□□ -0.17
CMTM3Q96MX0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CMTM3Q96MX0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 AC126365.1-201ENST00000578585 1514 ntBASIC14□□□□□ -0.17
CMTM3Q96MX0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CMTM3Q96MX0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14□□□□□ -0.17
CMTM3Q96MX0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CMTM3Q96MX0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14□□□□□ -0.17
CMTM3Q96MX0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CMTM3Q96MX0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14□□□□□ -0.17
CMTM3Q96MX0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms