Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 CYMP-203ENST00000474680 1263 ntBASIC16.8■□□□□ 0.28
IFT43Q96FT9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC020765.3-201ENST00000613051 740 ntBASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC105339.1-204ENST00000636249 355 ntBASIC16.8■□□□□ 0.28
IFT43Q96FT9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC099063.4-201ENST00000641099 1602 ntBASIC16.8■□□□□ 0.28
IFT43Q96FT9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
IFT43Q96FT9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AC140658.5-201ENST00000438532 169 ntBASIC16.79■□□□□ 0.28
IFT43Q96FT9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 FAM86C2P-203ENST00000528684 1004 ntBASIC16.79■□□□□ 0.28
IFT43Q96FT9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AC027612.4-201ENST00000605371 583 ntBASIC16.79■□□□□ 0.28
IFT43Q96FT9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.79■□□□□ 0.28
IFT43Q96FT9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFT43Q96FT9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFT43Q96FT9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms