Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRC58Q96CX6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 PKD1P5-201ENST00000532415 10291 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC087481.3-201ENST00000602886 1894 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 HAUS4P1-201ENST00000406739 1145 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 LAGE3P1-201ENST00000425356 484 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 SCARNA2-201ENST00000458748 420 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC025062.2-201ENST00000605477 670 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC008608.2-201ENST00000606089 416 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 AC138035.3-201ENST00000622706 2791 ntBASIC15.49■□□□□ 0.07
LRRC58Q96CX6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRC58Q96CX6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.48■□□□□ 0.07
LRRC58Q96CX6 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LRRC58Q96CX6 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms