Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 AL662844.4-201ENST00000606367 2838 ntBASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SHKBP1Q8TBC3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 GGT4P-201ENST00000623672 1708 ntBASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 AL603756.1-201ENST00000606511 2163 ntBASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 AC061975.2-201ENST00000581722 295 ntBASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
SHKBP1Q8TBC3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 GK-202ENST00000378941 458 ntTSL 3 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 COX5BP8-201ENST00000416911 349 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 NME2P1-201ENST00000426182 414 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 ZNF890P-202ENST00000530367 1156 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AC135586.1-201ENST00000539323 574 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 CR383656.12-201ENST00000549567 513 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AL512361.1-201ENST00000554200 418 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AC024267.1-201ENST00000582320 895 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AL132655.2-201ENST00000596276 594 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.03■□□□□ 0.32
SHKBP1Q8TBC3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.02■□□□□ 0.32
SHKBP1Q8TBC3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms