Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AL627223.1-201ENST00000416693 442 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC009477.1-201ENST00000452936 217 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 BAD-207ENST00000544785 525 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AL138918.1-201ENST00000568306 659 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 SERBP1P5-201ENST00000510079 1181 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AP005018.1-201ENST00000525475 301 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 HILS1-202ENST00000545329 423 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 COX11-202ENST00000571584 1108 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NME2P1-201ENST00000426182 414 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 FAM86GP-201ENST00000448322 971 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AL358472.5-202ENST00000641448 1267 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 STX3-207ENST00000633708 3111 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC141586.5-201ENST00000624546 2050 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE1Q8NF91 AC138028.4-201ENST00000564984 1845 ntBASIC5.06□□□□□ -1.6
SYNE1Q8NF91 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE1Q8NF91 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE1Q8NF91 HLA-V-201ENST00000429037 534 ntBASIC5.05□□□□□ -1.6
SYNE1Q8NF91 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE1Q8NF91 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE1Q8NF91 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNE1Q8NF91 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms