Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 AP3S2-216ENST00000617003 1561 ntBASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
RFWD3Q6PCD5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AC092364.2-201ENST00000596710 2692 ntBASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 FAM86GP-201ENST00000448322 971 ntBASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AC069262.1-201ENST00000539058 672 ntBASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AL512356.2-201ENST00000546955 174 ntBASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RFWD3Q6PCD5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RFWD3Q6PCD5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AL136379.1-201ENST00000623471 2642 ntBASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFWD3Q6PCD5 HMGN1P19-201ENST00000436976 333 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms