Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 IER3-202ENST00000376377 1350 ntBASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 AC129492.6-201ENST00000611383 1305 ntBASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 FAM45BP-202ENST00000592932 1624 ntBASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00242Q5T6M2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 AC087481.3-201ENST00000602886 1894 ntBASIC11.15□□□□□ -0.63
LINC00242Q5T6M2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 CICP13-201ENST00000422015 2789 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AL160237.2-201ENST00000556165 472 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms