Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BSXQ3C1V8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 PMS2P1-201ENST00000431037 1228 ntBASIC13.19□□□□□ -0.3
BSXQ3C1V8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 MTDHP4-201ENST00000600287 670 ntBASIC13.19□□□□□ -0.3
BSXQ3C1V8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 AC010654.1-201ENST00000615722 808 ntBASIC13.19□□□□□ -0.3
BSXQ3C1V8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.19□□□□□ -0.3
BSXQ3C1V8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 PI4KAP1-204ENST00000612579 1703 ntBASIC13.19□□□□□ -0.3
BSXQ3C1V8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BSXQ3C1V8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 PCDHA3-202ENST00000532566 4594 ntBASIC13.18□□□□□ -0.3
BSXQ3C1V8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.18□□□□□ -0.3
BSXQ3C1V8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BSXQ3C1V8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BSXQ3C1V8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms