Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 PAUPAR-201ENST00000630360 2965 ntBASIC16.46■□□□□ 0.23
PRAMEP78395 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 AL078644.1-201ENST00000609881 752 ntBASIC16.46■□□□□ 0.23
PRAMEP78395 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEP78395 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEP78395 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEP78395 AC016027.1-202ENST00000607927 1699 ntBASIC16.46■□□□□ 0.23
PRAMEP78395 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEP78395 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.46■□□□□ 0.22
PRAMEP78395 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEP78395 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
PRAMEP78395 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 AC092919.2-201ENST00000623631 1645 ntBASIC16.45■□□□□ 0.22
PRAMEP78395 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEP78395 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEP78395 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEP78395 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.45■□□□□ 0.22
PRAMEP78395 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEP78395 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEP78395 AL513190.1-201ENST00000621254 727 ntBASIC16.45■□□□□ 0.22
PRAMEP78395 AL161645.1-201ENST00000622716 1255 ntBASIC16.45■□□□□ 0.22
PRAMEP78395 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEP78395 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEP78395 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEP78395 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEP78395 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEP78395 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEP78395 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEP78395 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 AC007950.2-201ENST00000615045 2347 ntBASIC16.44■□□□□ 0.22
PRAMEP78395 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEP78395 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEP78395 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 AC002056.1-201ENST00000395613 760 ntBASIC16.44■□□□□ 0.22
PRAMEP78395 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEP78395 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEP78395 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEP78395 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.44■□□□□ 0.22
PRAMEP78395 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEP78395 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEP78395 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
PRAMEP78395 NORAD-201ENST00000565493 5339 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 465.1 ms