Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SMIM11AP58511 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.03■□□□□ -0
SMIM11AP58511 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.03■□□□□ -0
SMIM11AP58511 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM11AP58511 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02■□□□□ -0
SMIM11AP58511 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SMIM11AP58511 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SMIM11AP58511 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMIM11AP58511 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.02■□□□□ -0
SMIM11AP58511 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.02■□□□□ -0
SMIM11AP58511 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.02■□□□□ -0
SMIM11AP58511 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.02■□□□□ -0
SMIM11AP58511 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.02■□□□□ -0
SMIM11AP58511 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.02■□□□□ -0
SMIM11AP58511 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
SMIM11AP58511 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.02□□□□□ -0.01
SMIM11AP58511 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 MYO15B-237ENST00000642007 4893 ntBASIC15.02□□□□□ -0.01
SMIM11AP58511 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 AC008677.1-201ENST00000519230 1561 ntBASIC15.02□□□□□ -0.01
SMIM11AP58511 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SMIM11AP58511 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
SMIM11AP58511 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.02□□□□□ -0.01
SMIM11AP58511 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.02□□□□□ -0.01
SMIM11AP58511 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM11AP58511 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SMIM11AP58511 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC097376.2-205ENST00000610159 5334 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 RNU1-129P-201ENST00000384064 167 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.01□□□□□ -0.01
SMIM11AP58511 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC073648.2-201ENST00000510116 352 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.01□□□□□ -0.01
SMIM11AP58511 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 U1.21-201ENST00000580816 167 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AL365330.1-201ENST00000607459 531 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 AC073347.1-201ENST00000421633 2643 ntBASIC15.01□□□□□ -0.01
SMIM11AP58511 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMIM11AP58511 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SMIM11AP58511 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMIM11AP58511 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms