Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.17■□□□□ 0.34
SNX16P57768 AC022145.2-201ENST00000598203 171 ntBASIC17.17■□□□□ 0.34
SNX16P57768 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.17■□□□□ 0.34
SNX16P57768 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.17■□□□□ 0.34
SNX16P57768 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SNX16P57768 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNX16P57768 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SNX16P57768 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNX16P57768 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.16■□□□□ 0.34
SNX16P57768 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 AC142381.1-201ENST00000426099 345 ntBASIC17.16■□□□□ 0.34
SNX16P57768 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.16■□□□□ 0.34
SNX16P57768 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.16■□□□□ 0.34
SNX16P57768 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.16■□□□□ 0.34
SNX16P57768 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
SNX16P57768 AC067930.6-201ENST00000623257 4947 ntBASIC17.16■□□□□ 0.34
SNX16P57768 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNX16P57768 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNX16P57768 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNX16P57768 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX16P57768 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SNX16P57768 HAUS4P1-201ENST00000406739 1145 ntBASIC17.15■□□□□ 0.34
SNX16P57768 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.15■□□□□ 0.34
SNX16P57768 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX16P57768 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.15■□□□□ 0.34
SNX16P57768 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 RNA5SP410-201ENST00000516285 106 ntBASIC17.15■□□□□ 0.34
SNX16P57768 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX16P57768 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.15■□□□□ 0.34
SNX16P57768 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.15■□□□□ 0.34
SNX16P57768 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX16P57768 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX16P57768 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 DOC2GP-204ENST00000639052 2548 ntBASIC17.15■□□□□ 0.34
SNX16P57768 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.15■□□□□ 0.34
SNX16P57768 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
SNX16P57768 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNX16P57768 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.15■□□□□ 0.34
SNX16P57768 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNX16P57768 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SNX16P57768 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.14■□□□□ 0.34
SNX16P57768 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
SNX16P57768 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX16P57768 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SNX16P57768 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms