Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH4P55283 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH4P55283 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 KRT8P12-202ENST00000472924 1397 ntBASIC16.55■□□□□ 0.24
CDH4P55283 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 AC004987.2-201ENST00000395959 1148 ntBASIC16.55■□□□□ 0.24
CDH4P55283 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 AL080243.2-201ENST00000418783 582 ntBASIC16.55■□□□□ 0.24
CDH4P55283 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH4P55283 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH4P55283 HMGN1P19-201ENST00000436976 333 ntBASIC16.55■□□□□ 0.24
CDH4P55283 RNA5SP421-201ENST00000516864 134 ntBASIC16.55■□□□□ 0.24
CDH4P55283 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.55■□□□□ 0.24
CDH4P55283 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH4P55283 TEX28P1-201ENST00000613479 1221 ntBASIC16.55■□□□□ 0.24
CDH4P55283 TEX28P2-201ENST00000617764 1221 ntBASIC16.55■□□□□ 0.24
CDH4P55283 AL390754.1-201ENST00000619088 582 ntBASIC16.55■□□□□ 0.24
CDH4P55283 AL590560.3-201ENST00000623350 461 ntBASIC16.55■□□□□ 0.24
CDH4P55283 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH4P55283 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH4P55283 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH4P55283 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH4P55283 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 AP001282.1-201ENST00000531301 1499 ntBASIC16.54■□□□□ 0.24
CDH4P55283 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 AC100757.3-201ENST00000622361 1406 ntBASIC16.54■□□□□ 0.24
CDH4P55283 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH4P55283 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH4P55283 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH4P55283 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 CYP2T1P-202ENST00000641596 2535 ntBASIC16.54■□□□□ 0.24
CDH4P55283 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH4P55283 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH4P55283 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH4P55283 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH4P55283 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDH4P55283 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH4P55283 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH4P55283 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH4P55283 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.53■□□□□ 0.24
CDH4P55283 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms