Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSR1P43307 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.39■□□□□ 0.37
SSR1P43307 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 AP001005.1-201ENST00000571755 1248 ntBASIC17.39■□□□□ 0.37
SSR1P43307 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 AC104692.2-201ENST00000603054 253 ntBASIC17.39■□□□□ 0.37
SSR1P43307 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.39■□□□□ 0.37
SSR1P43307 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 LINC01144-201ENST00000626198 1710 ntBASIC17.38■□□□□ 0.37
SSR1P43307 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SSR1P43307 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR1P43307 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 CRYGEP-201ENST00000412192 528 ntBASIC17.38■□□□□ 0.37
SSR1P43307 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 FAM185BP-201ENST00000443595 716 ntBASIC17.38■□□□□ 0.37
SSR1P43307 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR1P43307 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.38■□□□□ 0.37
SSR1P43307 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 ACTL9-202ENST00000612068 1252 ntBASIC17.38■□□□□ 0.37
SSR1P43307 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.38■□□□□ 0.37
SSR1P43307 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 AC006449.6-201ENST00000612330 2296 ntBASIC17.38■□□□□ 0.37
SSR1P43307 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
SSR1P43307 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR1P43307 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SSR1P43307 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SSR1P43307 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR1P43307 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 REXO1L8P-201ENST00000604378 1897 ntBASIC17.37■□□□□ 0.37
SSR1P43307 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 MTHFR-217ENST00000641820 1569 ntBASIC17.37■□□□□ 0.37
SSR1P43307 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 UNC93B6-202ENST00000528242 690 ntBASIC17.37■□□□□ 0.37
SSR1P43307 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.37■□□□□ 0.37
SSR1P43307 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SSR1P43307 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 MIR4515-201ENST00000584082 81 ntBASIC17.37■□□□□ 0.37
SSR1P43307 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.37■□□□□ 0.37
SSR1P43307 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms