Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CDH3P22223 AC024909.3-201ENST00000611513 2257 ntBASIC16.01■□□□□ 0.15
CDH3P22223 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH3P22223 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH3P22223 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16■□□□□ 0.15
CDH3P22223 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CDH3P22223 UXT-AS1-201ENST00000590504 1525 ntBASIC16■□□□□ 0.15
CDH3P22223 PC-204ENST00000524491 1714 ntTSL 2 BASIC16■□□□□ 0.15
CDH3P22223 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16■□□□□ 0.15
CDH3P22223 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16■□□□□ 0.15
CDH3P22223 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 KRT18P32-201ENST00000424695 1287 ntBASIC16■□□□□ 0.15
CDH3P22223 SPCS2P4-201ENST00000436160 681 ntBASIC16■□□□□ 0.15
CDH3P22223 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16■□□□□ 0.15
CDH3P22223 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH3P22223 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CDH3P22223 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CDH3P22223 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH3P22223 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CDH3P22223 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDH3P22223 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CDH3P22223 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH3P22223 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDH3P22223 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDH3P22223 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CDH3P22223 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.99■□□□□ 0.15
CDH3P22223 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 KRT8P39-201ENST00000396270 1433 ntBASIC15.99■□□□□ 0.15
CDH3P22223 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.99■□□□□ 0.15
CDH3P22223 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CDH3P22223 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CDH3P22223 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.99■□□□□ 0.15
CDH3P22223 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDH3P22223 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 AL645728.1-201ENST00000366221 2101 ntBASIC15.98■□□□□ 0.15
CDH3P22223 DBET-201ENST00000630918 3363 ntBASIC15.98■□□□□ 0.15
CDH3P22223 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDH3P22223 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.98■□□□□ 0.15
CDH3P22223 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH3P22223 AC069335.1-201ENST00000489972 472 ntBASIC15.98■□□□□ 0.15
CDH3P22223 KRT8P23-201ENST00000560090 1207 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms