Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB3BP20337 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3BP20337 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3BP20337 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3BP20337 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB3BP20337 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB3BP20337 NSUN5P1-202ENST00000421140 1535 ntBASIC14.31□□□□□ -0.12
RAB3BP20337 NSUN5P2-203ENST00000457352 1529 ntBASIC14.31□□□□□ -0.12
RAB3BP20337 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB3BP20337 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 AC005622.1-201ENST00000636801 1703 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB3BP20337 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB3BP20337 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 PRYP5-201ENST00000451909 266 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 KRT17P6-201ENST00000453795 1220 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 AC087163.2-201ENST00000457299 853 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 AL136038.3-201ENST00000561909 1096 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB3BP20337 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB3BP20337 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 AP001350.2-201ENST00000625104 1094 ntBASIC14.3□□□□□ -0.12
RAB3BP20337 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB3BP20337 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB3BP20337 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB3BP20337 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB3BP20337 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 AL596275.1-201ENST00000423464 877 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 PMS2P1-201ENST00000431037 1228 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
RAB3BP20337 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 LINC01238-205ENST00000567549 1107 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB3BP20337 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB3BP20337 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 AC012306.2-201ENST00000609350 630 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 AC097493.4-201ENST00000641197 219 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 KRT18P1-202ENST00000452408 1331 ntBASIC14.29□□□□□ -0.12
RAB3BP20337 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB3BP20337 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB3BP20337 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB3BP20337 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB3BP20337 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms