Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 RPL13AP25-201ENST00000484130 612 ntBASIC15.71■□□□□ 0.11
DMDP11532 NUP210P1-202ENST00000504322 710 ntBASIC15.71■□□□□ 0.11
DMDP11532 AL139011.1-202ENST00000642063 584 ntBASIC15.71■□□□□ 0.11
DMDP11532 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DMDP11532 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
DMDP11532 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DMDP11532 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DMDP11532 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DMDP11532 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.71■□□□□ 0.11
DMDP11532 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DMDP11532 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
DMDP11532 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.71■□□□□ 0.1
DMDP11532 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.71■□□□□ 0.1
DMDP11532 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.71■□□□□ 0.1
DMDP11532 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.71■□□□□ 0.1
DMDP11532 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.71■□□□□ 0.1
DMDP11532 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.71■□□□□ 0.1
DMDP11532 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
DMDP11532 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
DMDP11532 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
DMDP11532 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.71■□□□□ 0.1
DMDP11532 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DMDP11532 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
DMDP11532 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.7■□□□□ 0.1
DMDP11532 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
DMDP11532 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DMDP11532 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 C2orf27AP3-201ENST00000434123 579 ntBASIC15.7■□□□□ 0.1
DMDP11532 RPSAP36-202ENST00000494591 1261 ntBASIC15.7■□□□□ 0.1
DMDP11532 AC022137.2-201ENST00000503482 481 ntBASIC15.7■□□□□ 0.1
DMDP11532 MIR3147-201ENST00000577811 66 ntBASIC15.7■□□□□ 0.1
DMDP11532 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.7■□□□□ 0.1
DMDP11532 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 AL354718.3-201ENST00000616414 581 ntBASIC15.7■□□□□ 0.1
DMDP11532 CR382287.1-201ENST00000623954 586 ntBASIC15.7■□□□□ 0.1
DMDP11532 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 MIR1227-201ENST00000408484 88 ntBASIC15.7■□□□□ 0.1
DMDP11532 CTBP2P4-201ENST00000513884 920 ntBASIC15.7■□□□□ 0.1
DMDP11532 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 AP001063.1-201ENST00000568332 529 ntBASIC15.7■□□□□ 0.1
DMDP11532 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
DMDP11532 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.7■□□□□ 0.1
DMDP11532 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.7■□□□□ 0.1
DMDP11532 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.7■□□□□ 0.1
DMDP11532 AC104596.2-201ENST00000512793 793 ntBASIC15.7■□□□□ 0.1
DMDP11532 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.7■□□□□ 0.1
DMDP11532 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.7■□□□□ 0.1
DMDP11532 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DMDP11532 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.69■□□□□ 0.1
DMDP11532 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 C1QBPP1-201ENST00000400117 770 ntBASIC15.69■□□□□ 0.1
DMDP11532 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.69■□□□□ 0.1
DMDP11532 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 AL353726.2-201ENST00000623259 884 ntBASIC15.69■□□□□ 0.1
DMDP11532 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.69■□□□□ 0.1
DMDP11532 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.69■□□□□ 0.1
DMDP11532 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
DMDP11532 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DMDP11532 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DMDP11532 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
DMDP11532 AL590640.2-201ENST00000457038 527 ntBASIC15.69■□□□□ 0.1
DMDP11532 AC026410.3-201ENST00000514280 936 ntBASIC15.69■□□□□ 0.1
DMDP11532 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms