Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PDE6DO43924 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PDE6DO43924 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PDE6DO43924 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 MROH4P-201ENST00000431302 1578 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 AC087386.2-201ENST00000623212 4637 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.65□□□□□ -0.38
PDE6DO43924 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 STARP1-201ENST00000397973 869 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.65□□□□□ -0.38
PDE6DO43924 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.65□□□□□ -0.38
PDE6DO43924 AC009533.2-201ENST00000543664 586 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 LINC01238-205ENST00000567549 1107 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 MIR4492-201ENST00000581627 80 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 MPDU1-223ENST00000582151 728 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.65□□□□□ -0.38
PDE6DO43924 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 Z83836.1-201ENST00000624605 1642 ntBASIC12.65□□□□□ -0.38
PDE6DO43924 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PDE6DO43924 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PDE6DO43924 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.65□□□□□ -0.38
PDE6DO43924 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PDE6DO43924 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.65□□□□□ -0.39
PDE6DO43924 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PDE6DO43924 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.64□□□□□ -0.39
PDE6DO43924 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.64□□□□□ -0.39
PDE6DO43924 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
PDE6DO43924 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PDE6DO43924 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 AL020989.1-201ENST00000422979 469 ntBASIC12.64□□□□□ -0.39
PDE6DO43924 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.64□□□□□ -0.39
PDE6DO43924 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.64□□□□□ -0.39
PDE6DO43924 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.64□□□□□ -0.39
PDE6DO43924 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.64□□□□□ -0.39
PDE6DO43924 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
PDE6DO43924 AL353801.3-201ENST00000609898 542 ntBASIC12.64□□□□□ -0.39
PDE6DO43924 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.64□□□□□ -0.39
PDE6DO43924 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.64□□□□□ -0.39
PDE6DO43924 AL023973.1-201ENST00000624619 620 ntBASIC12.64□□□□□ -0.39
PDE6DO43924 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms