Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 AC024909.3-201ENST00000611513 2257 ntBASIC15.57■□□□□ 0.08
PCDH17O14917 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDH17O14917 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDH17O14917 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDH17O14917 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
PCDH17O14917 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDH17O14917 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 AC105917.1-201ENST00000506637 2539 ntBASIC15.56■□□□□ 0.08
PCDH17O14917 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDH17O14917 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDH17O14917 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDH17O14917 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDH17O14917 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDH17O14917 LINC01225-203ENST00000563550 1244 ntBASIC15.56■□□□□ 0.08
PCDH17O14917 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDH17O14917 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 AC011467.4-201ENST00000594891 528 ntBASIC15.56■□□□□ 0.08
PCDH17O14917 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 AC093028.1-201ENST00000622998 982 ntBASIC15.56■□□□□ 0.08
PCDH17O14917 LINC00628-201ENST00000628516 1289 ntBASIC15.56■□□□□ 0.08
PCDH17O14917 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDH17O14917 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDH17O14917 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDH17O14917 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDH17O14917 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 MTHFR-217ENST00000641820 1569 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 KRT8P39-201ENST00000396270 1433 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 AL139400.1-201ENST00000366220 510 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms