Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 AP003680.1-201ENST00000598970 3660 ntBASIC15.57■□□□□ 0.08
PDLIM1O00151 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 AC003669.1-201ENST00000334569 611 ntBASIC15.57■□□□□ 0.08
PDLIM1O00151 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PDLIM1O00151 KLF4P1-201ENST00000412782 1185 ntBASIC15.57■□□□□ 0.08
PDLIM1O00151 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.57■□□□□ 0.08
PDLIM1O00151 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 RN7SL510P-201ENST00000581311 263 ntBASIC15.57■□□□□ 0.08
PDLIM1O00151 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 AL139011.1-202ENST00000642063 584 ntBASIC15.57■□□□□ 0.08
PDLIM1O00151 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.57■□□□□ 0.08
PDLIM1O00151 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PDLIM1O00151 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDLIM1O00151 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PDLIM1O00151 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PDLIM1O00151 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.56■□□□□ 0.08
PDLIM1O00151 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PDLIM1O00151 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AC132008.2-207ENST00000454517 770 ntBASIC15.56■□□□□ 0.08
PDLIM1O00151 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 LINC01711-201ENST00000598340 967 ntBASIC15.56■□□□□ 0.08
PDLIM1O00151 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.56■□□□□ 0.08
PDLIM1O00151 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDLIM1O00151 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDLIM1O00151 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
PDLIM1O00151 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDLIM1O00151 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PDLIM1O00151 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDLIM1O00151 AC005840.4-201ENST00000541242 2494 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms