Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC092580.3-201ENST00000430932 139 ntBASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AC020765.3-201ENST00000613051 740 ntBASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 SPTSSB-204ENST00000617024 1292 ntBASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AC073592.8-201ENST00000624126 511 ntBASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 GPAA1P2-202ENST00000606848 1787 ntBASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPA3F8WFD2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 AC241585.1-201ENST00000433527 519 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 AC002472.2-201ENST00000442739 958 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 TERF1P3-201ENST00000505638 1227 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 RN7SL204P-201ENST00000582831 262 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 FOXO1B-201ENST00000504678 1527 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 GGT3P-204ENST00000453783 1664 ntBASIC14.81□□□□□ -0.04
NPIPA3F8WFD2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 GGT4P-201ENST00000623672 1708 ntBASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 PCGF3-213ENST00000620529 1899 ntBASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA3F8WFD2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms