Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 KRT18P28-201ENST00000453838 1332 ntBASIC15.12■□□□□ 0.01
UBQLN3Q9H347 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 GGT4P-201ENST00000623672 1708 ntBASIC15.12■□□□□ 0.01
UBQLN3Q9H347 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN3Q9H347 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 FER1L4-210ENST00000615531 5998 ntBASIC15.11■□□□□ 0.01
UBQLN3Q9H347 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 PMS2P2-201ENST00000425039 1128 ntBASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AC023141.5-201ENST00000458585 616 ntBASIC15.11■□□□□ 0.01
UBQLN3Q9H347 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 LINC01225-203ENST00000563550 1244 ntBASIC15.11■□□□□ 0.01
UBQLN3Q9H347 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 AC016027.1-202ENST00000607927 1699 ntBASIC15.11■□□□□ 0.01
UBQLN3Q9H347 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN3Q9H347 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AL627223.1-201ENST00000416693 442 ntBASIC15.1■□□□□ 0.01
UBQLN3Q9H347 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 SPCS2P4-201ENST00000436160 681 ntBASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AC084121.4-201ENST00000641598 221 ntBASIC15.1■□□□□ 0.01
UBQLN3Q9H347 AF228730.8-201ENST00000642140 221 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms