Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.41□□□□□ -0.42
VGLL1Q99990 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.41□□□□□ -0.42
VGLL1Q99990 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.41□□□□□ -0.42
VGLL1Q99990 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.41□□□□□ -0.42
VGLL1Q99990 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.41□□□□□ -0.42
VGLL1Q99990 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.41□□□□□ -0.42
VGLL1Q99990 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.41□□□□□ -0.42
VGLL1Q99990 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.41□□□□□ -0.42
VGLL1Q99990 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.41□□□□□ -0.42
VGLL1Q99990 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.41□□□□□ -0.42
VGLL1Q99990 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.41□□□□□ -0.42
VGLL1Q99990 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VGLL1Q99990 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.41□□□□□ -0.42
VGLL1Q99990 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VGLL1Q99990 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 AP003680.1-201ENST00000598970 3660 ntBASIC12.4□□□□□ -0.42
VGLL1Q99990 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 AC126177.1-201ENST00000547829 2218 ntBASIC12.4□□□□□ -0.42
VGLL1Q99990 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.4□□□□□ -0.42
VGLL1Q99990 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.4□□□□□ -0.42
VGLL1Q99990 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VGLL1Q99990 UPK3BP1-201ENST00000428678 509 ntBASIC12.4□□□□□ -0.42
VGLL1Q99990 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.4□□□□□ -0.42
VGLL1Q99990 KRT18P31-201ENST00000506277 1292 ntBASIC12.4□□□□□ -0.42
VGLL1Q99990 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.4□□□□□ -0.42
VGLL1Q99990 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.4□□□□□ -0.42
VGLL1Q99990 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 MIR3652-201ENST00000579335 131 ntBASIC12.4□□□□□ -0.42
VGLL1Q99990 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.4□□□□□ -0.42
VGLL1Q99990 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VGLL1Q99990 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.4□□□□□ -0.42
VGLL1Q99990 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.4□□□□□ -0.42
VGLL1Q99990 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VGLL1Q99990 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VGLL1Q99990 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
VGLL1Q99990 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VGLL1Q99990 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VGLL1Q99990 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.4□□□□□ -0.43
VGLL1Q99990 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms