Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AC073347.1-201ENST00000421633 2643 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AC136632.2-201ENST00000512891 861 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 AC008667.4-201ENST00000607370 168 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 MIR7706-201ENST00000613747 67 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 PGM5P2-202ENST00000637225 1043 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SLC22A20-204ENST00000530038 1673 ntBASIC14.9□□□□□ -0.02
SNX18Q96RF0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNX18Q96RF0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
SNX18Q96RF0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 LINC01144-201ENST00000626198 1710 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 CICP14-201ENST00000629111 2732 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 RPS2P28-201ENST00000314255 741 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 GPALPP1-207ENST00000611650 899 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 FAM215A-202ENST00000632077 792 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 AL671710.1-201ENST00000610245 2349 ntBASIC14.89□□□□□ -0.03
SNX18Q96RF0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.89□□□□□ -0.03
SNX18Q96RF0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SNX18Q96RF0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms