Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SPCS2P4-201ENST00000436160 681 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SPDYE11-202ENST00000450699 704 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 POLD2P1-201ENST00000511220 997 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AP000842.3-202ENST00000569238 1080 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SPDYE9P-201ENST00000570642 692 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AL671883.3-201ENST00000603274 991 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SPDYE10P-202ENST00000612005 668 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SPDYE8P-202ENST00000612377 668 ntBASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDLIM5Q96HC4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AC079140.1-201ENST00000508039 487 ntBASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 KRT8P48-201ENST00000515599 1220 ntBASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PDLIM5Q96HC4 AL691432.1-201ENST00000596308 1422 ntBASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 HTR5BP-201ENST00000430851 1154 ntBASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM5Q96HC4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms