Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 AC007191.1-201ENST00000623179 2995 ntBASIC16.46■□□□□ 0.23
CHMP6Q96FZ7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP6Q96FZ7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CHMP6Q96FZ7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CHMP6Q96FZ7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.46■□□□□ 0.22
CHMP6Q96FZ7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP6Q96FZ7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 LINC00528-201ENST00000600723 2160 ntBASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 AC010654.1-201ENST00000615722 808 ntBASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 PGM5P2-202ENST00000637225 1043 ntBASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP6Q96FZ7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 AC139749.1-202ENST00000617529 3139 ntBASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 PCED1CP-201ENST00000419887 785 ntBASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 AC005336.2-201ENST00000593183 939 ntBASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 KRT18P1-202ENST00000452408 1331 ntBASIC16.44■□□□□ 0.22
CHMP6Q96FZ7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms