Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 PCGF3-213ENST00000620529 1899 ntBASIC17.15■□□□□ 0.34
GBF1Q92538 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.15■□□□□ 0.34
GBF1Q92538 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.15■□□□□ 0.34
GBF1Q92538 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.15■□□□□ 0.34
GBF1Q92538 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 AC016629.1-201ENST00000596579 586 ntBASIC17.15■□□□□ 0.34
GBF1Q92538 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.15■□□□□ 0.34
GBF1Q92538 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.15■□□□□ 0.34
GBF1Q92538 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GBF1Q92538 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.15■□□□□ 0.34
GBF1Q92538 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GBF1Q92538 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
GBF1Q92538 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBF1Q92538 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.15■□□□□ 0.34
GBF1Q92538 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
GBF1Q92538 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GBF1Q92538 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.14■□□□□ 0.33
GBF1Q92538 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.14■□□□□ 0.33
GBF1Q92538 AC093433.1-201ENST00000458048 571 ntBASIC17.14■□□□□ 0.33
GBF1Q92538 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.14■□□□□ 0.33
GBF1Q92538 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GBF1Q92538 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GBF1Q92538 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.14■□□□□ 0.33
GBF1Q92538 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GBF1Q92538 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GBF1Q92538 RPS2P36-201ENST00000456516 831 ntBASIC17.14■□□□□ 0.33
GBF1Q92538 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.14■□□□□ 0.33
GBF1Q92538 CHMP4BP1-201ENST00000556017 588 ntBASIC17.14■□□□□ 0.33
GBF1Q92538 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.14■□□□□ 0.33
GBF1Q92538 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBF1Q92538 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 AC009053.2-201ENST00000563701 2365 ntBASIC17.13■□□□□ 0.33
GBF1Q92538 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.13■□□□□ 0.33
GBF1Q92538 AC022137.2-201ENST00000503482 481 ntBASIC17.13■□□□□ 0.33
GBF1Q92538 AC107373.2-201ENST00000607735 490 ntBASIC17.13■□□□□ 0.33
GBF1Q92538 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 MIR6727-201ENST00000620702 65 ntBASIC17.13■□□□□ 0.33
GBF1Q92538 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GBF1Q92538 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
GBF1Q92538 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.13■□□□□ 0.33
GBF1Q92538 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GBF1Q92538 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBF1Q92538 AC134312.5-201ENST00000568031 1313 ntBASIC17.12■□□□□ 0.33
GBF1Q92538 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GBF1Q92538 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GBF1Q92538 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GBF1Q92538 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GBF1Q92538 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GBF1Q92538 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms