Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 KRT223P-202ENST00000449164 1292 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 SNX29P1-201ENST00000548357 1007 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 AC008735.3-201ENST00000596646 500 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 AC133552.6-201ENST00000613406 534 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 MIR8072-201ENST00000614241 80 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 REXO1L6P-201ENST00000603433 1515 ntBASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEFF1Q8IYR6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TMEFF1Q8IYR6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEFF1Q8IYR6 CDC14C-201ENST00000428251 1719 ntBASIC16.08■□□□□ 0.17
TMEFF1Q8IYR6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
TMEFF1Q8IYR6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEFF1Q8IYR6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AC005915.1-201ENST00000624912 2018 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 CROCCP4-201ENST00000457096 498 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AP002490.2-201ENST00000524791 560 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AP005482.1-201ENST00000563722 1273 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 TMEM261P1-201ENST00000604899 340 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEFF1Q8IYR6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 AC104596.2-201ENST00000512793 793 ntBASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 AC092337.1-201ENST00000568699 1129 ntBASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 AC074044.1-201ENST00000609673 707 ntBASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEFF1Q8IYR6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms