Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AJ011931.1-201ENST00000618749 2492 ntBASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD2Q8IV50 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 LINC01568-207ENST00000641790 1380 ntBASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 AC112693.3-201ENST00000624819 1983 ntBASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 AL390719.2-201ENST00000606993 987 ntBASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 SNX33P1-201ENST00000592116 1762 ntBASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 AC126755.1-201ENST00000525846 6405 ntBASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD2Q8IV50 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD2Q8IV50 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 STK19B-204ENST00000512515 211 ntBASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 KRT18P22-201ENST00000402024 1347 ntBASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms