Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPRIN2Q6IMN6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPRIN2Q6IMN6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CAPRIN2Q6IMN6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPRIN2Q6IMN6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CAPRIN2Q6IMN6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 AC092053.1-201ENST00000605787 1936 ntBASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 FAM185BP-201ENST00000443595 716 ntBASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 PGAM5P1-201ENST00000518923 814 ntBASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 AL355385.1-201ENST00000606123 409 ntBASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPRIN2Q6IMN6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 RNA5SP416-201ENST00000516838 111 ntBASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 AC107918.2-201ENST00000530817 355 ntBASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 AC096734.2-201ENST00000562054 433 ntBASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPRIN2Q6IMN6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 AC006058.4-201ENST00000624016 1670 ntBASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPRIN2Q6IMN6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms