Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
RPL39P62891 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.57□□□□□ -0.56
RPL39P62891 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RPL39P62891 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RPL39P62891 SBF1P1-201ENST00000444527 5631 ntBASIC11.56□□□□□ -0.56
RPL39P62891 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 AL109954.1-202ENST00000564051 2148 ntBASIC11.56□□□□□ -0.56
RPL39P62891 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
RPL39P62891 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 BX276092.5-203ENST00000456199 560 ntBASIC11.56□□□□□ -0.56
RPL39P62891 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.56□□□□□ -0.56
RPL39P62891 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 AC010331.1-201ENST00000611423 582 ntBASIC11.56□□□□□ -0.56
RPL39P62891 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.56□□□□□ -0.56
RPL39P62891 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.56□□□□□ -0.56
RPL39P62891 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 AC106881.1-201ENST00000605849 3329 ntBASIC11.56□□□□□ -0.56
RPL39P62891 AC079776.2-201ENST00000641154 1609 ntBASIC11.56□□□□□ -0.56
RPL39P62891 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RPL39P62891 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.56□□□□□ -0.56
RPL39P62891 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RPL39P62891 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 CICP13-201ENST00000422015 2789 ntBASIC11.55□□□□□ -0.56
RPL39P62891 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RPL39P62891 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.55□□□□□ -0.56
RPL39P62891 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms