Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 IGHV3-65-201ENST00000523210 341 ntBASIC11.65□□□□□ -0.54
UBE2D3P61077 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.65□□□□□ -0.54
UBE2D3P61077 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.65□□□□□ -0.54
UBE2D3P61077 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
UBE2D3P61077 CLEC4GP1-201ENST00000596555 870 ntBASIC11.65□□□□□ -0.54
UBE2D3P61077 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.65□□□□□ -0.54
UBE2D3P61077 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.65□□□□□ -0.54
UBE2D3P61077 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
UBE2D3P61077 AC008735.5-201ENST00000623544 497 ntBASIC11.65□□□□□ -0.54
UBE2D3P61077 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.65□□□□□ -0.54
UBE2D3P61077 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
UBE2D3P61077 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 GRK6P1-201ENST00000400595 1711 ntBASIC11.65□□□□□ -0.54
UBE2D3P61077 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.65□□□□□ -0.54
UBE2D3P61077 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBE2D3P61077 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.65□□□□□ -0.55
UBE2D3P61077 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.65□□□□□ -0.55
UBE2D3P61077 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.65□□□□□ -0.55
UBE2D3P61077 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.65□□□□□ -0.55
UBE2D3P61077 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D3P61077 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
UBE2D3P61077 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
UBE2D3P61077 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 AC013268.4-201ENST00000637413 2228 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 DUSP5P1-201ENST00000441325 1139 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 RNPS1P1-201ENST00000507437 918 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.64□□□□□ -0.55
UBE2D3P61077 AC105339.3-201ENST00000560043 636 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.64□□□□□ -0.55
UBE2D3P61077 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.64□□□□□ -0.55
UBE2D3P61077 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 AC010654.1-201ENST00000615722 808 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 AC012313.10-201ENST00000623509 926 ntBASIC11.64□□□□□ -0.55
UBE2D3P61077 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.64□□□□□ -0.55
UBE2D3P61077 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.64□□□□□ -0.55
UBE2D3P61077 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBE2D3P61077 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.63□□□□□ -0.55
UBE2D3P61077 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
UBE2D3P61077 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
UBE2D3P61077 AL359258.3-201ENST00000622910 2331 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms