Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BRCC3P46736 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 AL589987.1-201ENST00000453380 819 ntBASIC17.22■□□□□ 0.35
BRCC3P46736 DOC2GP-202ENST00000514950 1163 ntBASIC17.22■□□□□ 0.35
BRCC3P46736 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.22■□□□□ 0.35
BRCC3P46736 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.22■□□□□ 0.35
BRCC3P46736 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.22■□□□□ 0.35
BRCC3P46736 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
BRCC3P46736 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BRCC3P46736 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCC3P46736 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BRCC3P46736 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 AL691432.1-201ENST00000596308 1422 ntBASIC17.21■□□□□ 0.35
BRCC3P46736 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.21■□□□□ 0.35
BRCC3P46736 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 NKILA-202ENST00000614771 2598 ntBASIC17.21■□□□□ 0.35
BRCC3P46736 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRCC3P46736 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
BRCC3P46736 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.21■□□□□ 0.35
BRCC3P46736 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 SDHAP3-202ENST00000515467 728 ntBASIC17.21■□□□□ 0.35
BRCC3P46736 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
BRCC3P46736 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCC3P46736 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCC3P46736 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.21■□□□□ 0.34
BRCC3P46736 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BRCC3P46736 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
BRCC3P46736 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
BRCC3P46736 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BRCC3P46736 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRCC3P46736 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRCC3P46736 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BRCC3P46736 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.2■□□□□ 0.34
BRCC3P46736 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BRCC3P46736 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms