Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AL513210.1-201ENST00000629608 234 ntBASIC17.1■□□□□ 0.33
PDGFRAP16234 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PDGFRAP16234 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFRAP16234 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.1■□□□□ 0.33
PDGFRAP16234 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.09■□□□□ 0.33
PDGFRAP16234 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PDGFRAP16234 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDGFRAP16234 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 SPCS2P4-201ENST00000436160 681 ntBASIC17.09■□□□□ 0.33
PDGFRAP16234 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDGFRAP16234 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.09■□□□□ 0.33
PDGFRAP16234 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.09■□□□□ 0.33
PDGFRAP16234 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.09■□□□□ 0.33
PDGFRAP16234 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDGFRAP16234 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDGFRAP16234 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PDGFRAP16234 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDGFRAP16234 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.08■□□□□ 0.32
PDGFRAP16234 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.08■□□□□ 0.32
PDGFRAP16234 LINC01225-203ENST00000563550 1244 ntBASIC17.08■□□□□ 0.32
PDGFRAP16234 AL365330.1-201ENST00000607459 531 ntBASIC17.08■□□□□ 0.32
PDGFRAP16234 SPTSSB-204ENST00000617024 1292 ntBASIC17.08■□□□□ 0.32
PDGFRAP16234 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.08■□□□□ 0.32
PDGFRAP16234 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.08■□□□□ 0.32
PDGFRAP16234 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDGFRAP16234 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PDGFRAP16234 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDGFRAP16234 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PDGFRAP16234 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PDGFRAP16234 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDGFRAP16234 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PDGFRAP16234 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFRAP16234 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.07■□□□□ 0.32
PDGFRAP16234 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDGFRAP16234 AC024909.3-201ENST00000611513 2257 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms