Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.83■□□□□ 0.45
CLTAP09496 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.83■□□□□ 0.45
CLTAP09496 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLTAP09496 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CLTAP09496 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLTAP09496 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CLTAP09496 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.83■□□□□ 0.44
CLTAP09496 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.83■□□□□ 0.44
CLTAP09496 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.83■□□□□ 0.44
CLTAP09496 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.83■□□□□ 0.44
CLTAP09496 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLTAP09496 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLTAP09496 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLTAP09496 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.83■□□□□ 0.44
CLTAP09496 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CLTAP09496 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.83■□□□□ 0.44
CLTAP09496 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 AP3S2-216ENST00000617003 1561 ntBASIC17.83■□□□□ 0.44
CLTAP09496 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLTAP09496 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLTAP09496 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLTAP09496 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 FAM220BP-201ENST00000377689 816 ntBASIC17.82■□□□□ 0.44
CLTAP09496 HLA-H-201ENST00000383620 1096 ntBASIC17.82■□□□□ 0.44
CLTAP09496 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLTAP09496 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.82■□□□□ 0.44
CLTAP09496 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.82■□□□□ 0.44
CLTAP09496 AC069262.1-201ENST00000539058 672 ntBASIC17.82■□□□□ 0.44
CLTAP09496 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 RARRES2P9-201ENST00000565168 469 ntBASIC17.82■□□□□ 0.44
CLTAP09496 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.82■□□□□ 0.44
CLTAP09496 AC015911.4-201ENST00000588022 1070 ntBASIC17.82■□□□□ 0.44
CLTAP09496 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.82■□□□□ 0.44
CLTAP09496 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.82■□□□□ 0.44
CLTAP09496 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLTAP09496 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLTAP09496 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLTAP09496 AC005622.1-201ENST00000636801 1703 ntBASIC17.81■□□□□ 0.44
CLTAP09496 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 ME2P1-201ENST00000426028 1970 ntBASIC17.81■□□□□ 0.44
CLTAP09496 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.81■□□□□ 0.44
CLTAP09496 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLTAP09496 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.81■□□□□ 0.44
CLTAP09496 SPDYE7P-202ENST00000420373 878 ntBASIC17.81■□□□□ 0.44
CLTAP09496 CNN2P2-201ENST00000443536 909 ntBASIC17.81■□□□□ 0.44
CLTAP09496 CNN2P3-201ENST00000450201 906 ntBASIC17.81■□□□□ 0.44
CLTAP09496 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.81■□□□□ 0.44
CLTAP09496 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms