Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CAPNS1P04632 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CAPNS1P04632 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPNS1P04632 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPNS1P04632 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPNS1P04632 KRT8P23-201ENST00000560090 1207 ntBASIC16.22■□□□□ 0.19
CAPNS1P04632 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPNS1P04632 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPNS1P04632 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CAPNS1P04632 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CAPNS1P04632 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPNS1P04632 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPNS1P04632 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CAPNS1P04632 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPNS1P04632 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPNS1P04632 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPNS1P04632 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPNS1P04632 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPNS1P04632 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPNS1P04632 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CAPNS1P04632 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CAPNS1P04632 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CAPNS1P04632 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CAPNS1P04632 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CAPNS1P04632 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CAPNS1P04632 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.21■□□□□ 0.18
CAPNS1P04632 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CAPNS1P04632 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CAPNS1P04632 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 AC079776.1-201ENST00000401540 1152 ntBASIC16.2■□□□□ 0.18
CAPNS1P04632 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPNS1P04632 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.2■□□□□ 0.18
CAPNS1P04632 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPNS1P04632 TP53TG3HP-202ENST00000569755 579 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms