Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CDRT1O95170 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.6□□□□□ -0.07
CDRT1O95170 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.6□□□□□ -0.07
CDRT1O95170 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CDRT1O95170 PMPCAP1-201ENST00000508114 1576 ntBASIC14.6□□□□□ -0.07
CDRT1O95170 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDRT1O95170 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 MYO15B-237ENST00000642007 4893 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.59□□□□□ -0.07
CDRT1O95170 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.59□□□□□ -0.07
CDRT1O95170 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 MIR648-201ENST00000385046 94 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 RCN1P2-201ENST00000398357 915 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 TSSC2-201ENST00000450217 709 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.59□□□□□ -0.07
CDRT1O95170 FAM86EP-206ENST00000510506 987 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.59□□□□□ -0.07
CDRT1O95170 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDRT1O95170 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
CDRT1O95170 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 SBF1P1-201ENST00000444527 5631 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 AC007326.2-201ENST00000624224 7579 ntBASIC14.59□□□□□ -0.07
CDRT1O95170 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDRT1O95170 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDRT1O95170 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDRT1O95170 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDRT1O95170 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.58□□□□□ -0.07
CDRT1O95170 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CDRT1O95170 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDRT1O95170 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDRT1O95170 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDRT1O95170 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDRT1O95170 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDRT1O95170 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.58□□□□□ -0.08
CDRT1O95170 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDRT1O95170 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDRT1O95170 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDRT1O95170 NSUN5P1-202ENST00000421140 1535 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 NSUN5P2-203ENST00000457352 1529 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.58□□□□□ -0.08
CDRT1O95170 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDRT1O95170 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDRT1O95170 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CDRT1O95170 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.58□□□□□ -0.08
CDRT1O95170 KRT17P6-201ENST00000453795 1220 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 SIGLEC30P-201ENST00000455569 941 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 TOB2P1-201ENST00000469761 992 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 KRT18P21-201ENST00000515767 1272 ntBASIC14.58□□□□□ -0.08
CDRT1O95170 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms