Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 AC078925.2-201ENST00000624013 1973 ntBASIC18.11■□□□□ 0.49
CLSTN1O94985 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
CLSTN1O94985 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
CLSTN1O94985 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.11■□□□□ 0.49
CLSTN1O94985 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CLSTN1O94985 TSPY26P-202ENST00000565928 3884 ntBASIC18.1■□□□□ 0.49
CLSTN1O94985 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLSTN1O94985 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLSTN1O94985 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CLSTN1O94985 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.1■□□□□ 0.49
CLSTN1O94985 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 MIR574-201ENST00000385209 96 ntBASIC18.1■□□□□ 0.49
CLSTN1O94985 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLSTN1O94985 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.1■□□□□ 0.49
CLSTN1O94985 FAM185BP-201ENST00000443595 716 ntBASIC18.1■□□□□ 0.49
CLSTN1O94985 KRT18P2-201ENST00000447938 1258 ntBASIC18.1■□□□□ 0.49
CLSTN1O94985 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.1■□□□□ 0.49
CLSTN1O94985 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CLSTN1O94985 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.1■□□□□ 0.49
CLSTN1O94985 AC096734.2-201ENST00000562054 433 ntBASIC18.1■□□□□ 0.49
CLSTN1O94985 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLSTN1O94985 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 SLC22A20-204ENST00000530038 1673 ntBASIC18.09■□□□□ 0.49
CLSTN1O94985 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.09■□□□□ 0.49
CLSTN1O94985 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 PMS2P7-201ENST00000506558 1336 ntBASIC18.09■□□□□ 0.49
CLSTN1O94985 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 HCG4-201ENST00000418983 998 ntBASIC18.09■□□□□ 0.49
CLSTN1O94985 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.09■□□□□ 0.49
CLSTN1O94985 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLSTN1O94985 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.09■□□□□ 0.49
CLSTN1O94985 CYP2A7P1-201ENST00000595391 815 ntBASIC18.09■□□□□ 0.49
CLSTN1O94985 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CLSTN1O94985 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
CLSTN1O94985 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLSTN1O94985 AC006277.1-201ENST00000624348 1610 ntBASIC18.09■□□□□ 0.49
CLSTN1O94985 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLSTN1O94985 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLSTN1O94985 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLSTN1O94985 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLSTN1O94985 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.08■□□□□ 0.49
CLSTN1O94985 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.08■□□□□ 0.49
CLSTN1O94985 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLSTN1O94985 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.08■□□□□ 0.49
CLSTN1O94985 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.49
CLSTN1O94985 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CLSTN1O94985 TCAF2P1-201ENST00000291129 2421 ntBASIC18.08■□□□□ 0.49
CLSTN1O94985 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLSTN1O94985 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLSTN1O94985 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.08■□□□□ 0.48
CLSTN1O94985 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.08■□□□□ 0.48
CLSTN1O94985 AL513190.1-201ENST00000621254 727 ntBASIC18.08■□□□□ 0.48
CLSTN1O94985 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms