Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF40O75150 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF40O75150 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RNF40O75150 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF40O75150 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF40O75150 FAM58CP-201ENST00000435741 640 ntBASIC17.66■□□□□ 0.42
RNF40O75150 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 RHOQP3-201ENST00000437982 621 ntBASIC17.66■□□□□ 0.42
RNF40O75150 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RNF40O75150 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF40O75150 AC027612.4-201ENST00000605371 583 ntBASIC17.66■□□□□ 0.42
RNF40O75150 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 AP001002.2-201ENST00000625137 386 ntBASIC17.66■□□□□ 0.42
RNF40O75150 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF40O75150 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RNF40O75150 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF40O75150 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF40O75150 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF40O75150 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF40O75150 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF40O75150 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF40O75150 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF40O75150 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF40O75150 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF40O75150 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
RNF40O75150 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF40O75150 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF40O75150 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF40O75150 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF40O75150 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF40O75150 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF40O75150 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF40O75150 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
RNF40O75150 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF40O75150 AC074386.1-202ENST00000463561 864 ntBASIC17.64■□□□□ 0.41
RNF40O75150 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms