Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF103-CHMP3A0A140T963 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CLEC4GP1-201ENST00000596555 870 ntBASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF103-CHMP3A0A140T963 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 SLC25A6P2-201ENST00000497974 877 ntBASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 REXO1L3P-201ENST00000622202 1288 ntBASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 AC107918.4-202ENST00000641623 219 ntBASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF103-CHMP3A0A140T963 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC022532.1-201ENST00000624563 1728 ntBASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF103-CHMP3A0A140T963 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 AL671710.1-201ENST00000610245 2349 ntBASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF103-CHMP3A0A140T963 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms