Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AC006486.2-201ENST00000624246 2199 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 LINC01238-205ENST00000567549 1107 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AC064862.7-201ENST00000604520 867 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AC020765.3-201ENST00000613051 740 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 AC016734.2-201ENST00000624325 1377 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 NCF1C-201ENST00000438382 1427 ntBASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV18A0A075B6X5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 AC020658.6-201ENST00000623564 1870 ntBASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 AC092919.2-201ENST00000623631 1645 ntBASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV18A0A075B6X5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV18A0A075B6X5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms