Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 AL118508.1-201ENST00000613502 2345 ntBASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSNK1G3Q9Y6M4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AL391825.1-201ENST00000457671 1364 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 KRT8P12-202ENST00000472924 1397 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AC135586.1-201ENST00000539323 574 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AC004840.1-201ENST00000636359 365 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 CU639417.3-201ENST00000624240 1404 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AC060834.1-201ENST00000443027 2032 ntBASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSNK1G3Q9Y6M4 AL031731.1-201ENST00000642131 2094 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 COX5BP8-201ENST00000416911 349 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 DFFBP1-201ENST00000433250 979 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 AL132655.2-201ENST00000596276 594 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 AC006538.1-201ENST00000567905 1585 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 AC007541.1-201ENST00000570282 1469 ntBASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1G3Q9Y6M4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms