Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 BX640515.1-201ENST00000617215 977 ntBASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AC117500.6-201ENST00000624871 588 ntBASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AL590627.1-203ENST00000421194 1026 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AC087163.2-201ENST00000457299 853 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 IGHV3-22-201ENST00000520721 359 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 IGHV3-65-201ENST00000523210 341 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 PI4KAP1-204ENST00000612579 1703 ntBASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LIN7CQ9NUP9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.6□□□□□ -0.23
LIN7CQ9NUP9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms