Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.67■□□□□ 0.58
ARID3AQ99856 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
ARID3AQ99856 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.67■□□□□ 0.58
ARID3AQ99856 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.67■□□□□ 0.58
ARID3AQ99856 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.67■□□□□ 0.58
ARID3AQ99856 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
ARID3AQ99856 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ARID3AQ99856 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.67■□□□□ 0.58
ARID3AQ99856 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ARID3AQ99856 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.67■□□□□ 0.58
ARID3AQ99856 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARID3AQ99856 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.66■□□□□ 0.58
ARID3AQ99856 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.66■□□□□ 0.58
ARID3AQ99856 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.66■□□□□ 0.58
ARID3AQ99856 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.66■□□□□ 0.58
ARID3AQ99856 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.66■□□□□ 0.58
ARID3AQ99856 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ARID3AQ99856 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 AC079776.2-201ENST00000641154 1609 ntBASIC18.66■□□□□ 0.58
ARID3AQ99856 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARID3AQ99856 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.66■□□□□ 0.58
ARID3AQ99856 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ARID3AQ99856 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ARID3AQ99856 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 BX005266.1-201ENST00000473402 457 ntBASIC18.65■□□□□ 0.58
ARID3AQ99856 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.65■□□□□ 0.58
ARID3AQ99856 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ARID3AQ99856 AF238378.1-201ENST00000526806 358 ntBASIC18.65■□□□□ 0.58
ARID3AQ99856 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 AC073592.4-201ENST00000623827 446 ntBASIC18.65■□□□□ 0.58
ARID3AQ99856 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 AC097376.2-205ENST00000610159 5334 ntBASIC18.65■□□□□ 0.58
ARID3AQ99856 AC116353.5-201ENST00000638148 1699 ntBASIC18.65■□□□□ 0.58
ARID3AQ99856 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms