Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
S1PR3Q99500 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
S1PR3Q99500 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
S1PR3Q99500 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
S1PR3Q99500 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
S1PR3Q99500 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
S1PR3Q99500 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
S1PR3Q99500 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
S1PR3Q99500 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
S1PR3Q99500 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.51□□□□□ -0.25
S1PR3Q99500 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.51□□□□□ -0.25
S1PR3Q99500 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.51□□□□□ -0.25
S1PR3Q99500 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
S1PR3Q99500 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.51□□□□□ -0.25
S1PR3Q99500 AC034105.1-201ENST00000563488 319 ntBASIC13.51□□□□□ -0.25
S1PR3Q99500 MIR3909-201ENST00000579518 119 ntBASIC13.51□□□□□ -0.25
S1PR3Q99500 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.51□□□□□ -0.25
S1PR3Q99500 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.51□□□□□ -0.25
S1PR3Q99500 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.51□□□□□ -0.25
S1PR3Q99500 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
S1PR3Q99500 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.5□□□□□ -0.25
S1PR3Q99500 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.5□□□□□ -0.25
S1PR3Q99500 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.5□□□□□ -0.25
S1PR3Q99500 SLC25A1P1-201ENST00000528351 927 ntBASIC13.5□□□□□ -0.25
S1PR3Q99500 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AL031055.1-201ENST00000606362 631 ntBASIC13.5□□□□□ -0.25
S1PR3Q99500 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 AC007064.4-201ENST00000637740 555 ntBASIC13.5□□□□□ -0.25
S1PR3Q99500 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms