Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX11Q96FC9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX11Q96FC9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AL135744.1-201ENST00000565098 629 ntBASIC19.38■□□□□ 0.69
DDX11Q96FC9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DDX11Q96FC9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX11Q96FC9 AC046158.3-201ENST00000624947 2558 ntBASIC19.38■□□□□ 0.69
DDX11Q96FC9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 PCGF3-213ENST00000620529 1899 ntBASIC19.37■□□□□ 0.69
DDX11Q96FC9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.37■□□□□ 0.69
DDX11Q96FC9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 AKAP8P1-201ENST00000434743 1349 ntBASIC19.37■□□□□ 0.69
DDX11Q96FC9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 AC243562.1-201ENST00000560672 389 ntBASIC19.37■□□□□ 0.69
DDX11Q96FC9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX11Q96FC9 AL513523.2-202ENST00000427283 2040 ntBASIC19.37■□□□□ 0.69
DDX11Q96FC9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX11Q96FC9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX11Q96FC9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX11Q96FC9 KRT18P32-201ENST00000424695 1287 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms