Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC112191.1-201ENST00000523689 701 ntBASIC17.25■□□□□ 0.35
TRIM11Q96F44 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC002347.1-201ENST00000569543 541 ntBASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 AL590627.1-203ENST00000421194 1026 ntBASIC17.24■□□□□ 0.35
TRIM11Q96F44 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 KRT18P2-201ENST00000447938 1258 ntBASIC17.24■□□□□ 0.35
TRIM11Q96F44 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 AL589702.1-201ENST00000641229 1509 ntBASIC17.24■□□□□ 0.35
TRIM11Q96F44 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM11Q96F44 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM11Q96F44 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 BX640515.1-201ENST00000617215 977 ntBASIC17.23■□□□□ 0.35
TRIM11Q96F44 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM11Q96F44 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM11Q96F44 AL162727.3-201ENST00000635661 2787 ntBASIC17.23■□□□□ 0.35
TRIM11Q96F44 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms