Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NCLNQ969V3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
NCLNQ969V3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCLNQ969V3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.91■□□□□ 0.14
NCLNQ969V3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCLNQ969V3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCLNQ969V3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCLNQ969V3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCLNQ969V3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NCLNQ969V3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.9■□□□□ 0.14
NCLNQ969V3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.9■□□□□ 0.14
NCLNQ969V3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
NCLNQ969V3 RNA5SP416-201ENST00000516838 111 ntBASIC15.9■□□□□ 0.14
NCLNQ969V3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.9■□□□□ 0.14
NCLNQ969V3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.9■□□□□ 0.14
NCLNQ969V3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NCLNQ969V3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.9■□□□□ 0.14
NCLNQ969V3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 LINC00895-201ENST00000629028 1637 ntBASIC15.9■□□□□ 0.14
NCLNQ969V3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.9■□□□□ 0.14
NCLNQ969V3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NCLNQ969V3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCLNQ969V3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 AC103702.1-201ENST00000548801 2630 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
NCLNQ969V3 AC087163.2-201ENST00000457299 853 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 OR7E47P-204ENST00000575924 449 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 AL365203.3-201ENST00000609742 2057 ntBASIC15.89■□□□□ 0.13
NCLNQ969V3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.89■□□□□ 0.13
NCLNQ969V3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCLNQ969V3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.89■□□□□ 0.13
NCLNQ969V3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms