Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.2■□□□□ 0.34
ATP2A3Q93084 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 PCDHB17P-201ENST00000539533 2393 ntBASIC17.2■□□□□ 0.34
ATP2A3Q93084 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 COX20P2-201ENST00000452636 358 ntBASIC17.2■□□□□ 0.34
ATP2A3Q93084 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 MIR4492-201ENST00000581627 80 ntBASIC17.2■□□□□ 0.34
ATP2A3Q93084 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP2A3Q93084 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP2A3Q93084 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 FO538757.1-201ENST00000623083 1397 ntBASIC17.19■□□□□ 0.34
ATP2A3Q93084 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 AP002490.2-201ENST00000524791 560 ntBASIC17.19■□□□□ 0.34
ATP2A3Q93084 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.19■□□□□ 0.34
ATP2A3Q93084 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ATP2A3Q93084 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATP2A3Q93084 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 TREML5P-201ENST00000421694 576 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.18■□□□□ 0.34
ATP2A3Q93084 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.18■□□□□ 0.34
ATP2A3Q93084 KRT18P34-201ENST00000488218 1270 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms